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    gon4la gon-4 like a [ Danio rerio (zebrafish) ]

    Gene ID: 560418, updated on 27-Mar-2024

    Summary

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    Official Symbol
    gon4laprovided by ZNC
    Official Full Name
    gon-4 like aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060503-728
    See related
    AllianceGenome:ZFIN:ZDB-GENE-060503-728
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    udu2; si:dkey-27c15.3
    Summary
    Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in nucleus. Orthologous to human GON4L (gon-4 like). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    Location:
    chromosome: 19
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (26678915..26717912)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (27094699..27133550)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene natriuretic peptide receptor 1a Neighboring gene integrator complex subunit 3 Neighboring gene protein disulfide isomerase family A, member 8 Neighboring gene casein kinase 2, beta polypeptide

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Lo J, et al. Genome Res, 2003 Mar. PMID 12618376, Free PMC Article
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables transcription coregulator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    GON-4-like protein; uncharacterized protein LOC560418

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      26678915..26717912
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003200603.5 → XP_003200651.2  GON-4-like protein

      UniProtKB/TrEMBL
      A0A8M1RJB6
      Conserved Domains (2) summary
      cd12202
      Location:1526 → 1590
      CASP8AP2; Caspase 8-associated protein 2 myb-like domain
      pfam02671
      Location:1304 → 1349
      PAH; Paired amphipathic helix repeat
    Nucleotide Protein Strain
    Heading Accession and Version

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